Solyc04g039820.3.1 (ACCD, Solyc04g039820)


Aliases : ACCD, Solyc04g039820

Description : Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Liriodendron tulipifera (sp|q0g9l0|accd_lirtu : 146.0)


Gene families : OG0006595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006595_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g039820.3.1

Target Alias Description ECC score Gene Family Method Actions
ATCG00500 ACCD acetyl-CoA carboxylase carboxyl transferase subunit beta 0.1 OrthoFinder output from all 47 species
Aev_g18312 ACCD EC_6.4 ligase forming carbon-carbon bond & original... 0.16 OrthoFinder output from all 47 species
Ala_g08050 ACCD EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Als_g01688 ACCD EC_6.4 ligase forming carbon-carbon bond & original... 0.06 OrthoFinder output from all 47 species
Azfi_s2277.g110160 ACCD not classified & original description: CDS=1-426 0.05 OrthoFinder output from all 47 species
Ceric.02G014300.1 ACCD, Ceric.02G014300 EC_6.4 ligase forming carbon-carbon bond & original... 0.08 OrthoFinder output from all 47 species
Ceric.05G049800.1 ACCD, Ceric.05G049800 not classified & original description: pacid=50578464... 0.09 OrthoFinder output from all 47 species
Ceric.1Z018100.1 ACCD, Ceric.1Z018100 not classified & original description: pacid=50586349... 0.08 OrthoFinder output from all 47 species
Ceric.1Z141900.1 ACCD, Ceric.1Z141900 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G033500.1 ACCD, Ceric.29G033500 EC_6.4 ligase forming carbon-carbon bond & original... 0.09 OrthoFinder output from all 47 species
Ceric.33G022300.1 ACCD, Ceric.33G022300 EC_6.4 ligase forming carbon-carbon bond & original... 0.05 OrthoFinder output from all 47 species
Ceric.38G006600.1 ACCD, Ceric.38G006600 EC_6.4 ligase forming carbon-carbon bond & original... 0.14 OrthoFinder output from all 47 species
Gb_03850 ACCD carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.08 OrthoFinder output from all 47 species
Gb_06829 ACCD carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.07 OrthoFinder output from all 47 species
Gb_09759 ACCD Enzyme classification.EC_6 ligases.EC_6.4 ligase forming... 0.03 OrthoFinder output from all 47 species
Gb_11364 ACCD Acetyl-coenzyme A carboxylase carboxyl transferase... 0.03 OrthoFinder output from all 47 species
Gb_15504 ACCD carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.08 OrthoFinder output from all 47 species
Gb_17284 ACCD carboxyltransferase subunit beta of polymeric acetyl-CoA... 0.06 OrthoFinder output from all 47 species
Nbi_g00478 ACCD EC_6.4 ligase forming carbon-carbon bond & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0042301 phosphate ion binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!