Solyc04g055160.3.1 (Solyc04g055160)


Aliases : Solyc04g055160

Description : no hits & (original description: none)


Gene families : OG0001287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001287_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g055160.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00180440 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT4G39860 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Als_g09322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11847.t1 Aspi01Gene11847 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G036400.1 Ceric.03G036400 not classified & original description: pacid=50572452... 0.02 OrthoFinder output from all 47 species
Dac_g15149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g36500.1 LOC_Os02g36500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g38310.1 LOC_Os04g38310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g14907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31085 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_13107g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g05870.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g02771 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g38636 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g50783 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051301 cell division IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR025131 DUF4057 3 308
No external refs found!