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  5. Solyc04g071560.4.1

Solyc04g071560.4.1 (TY1, TRX-Y1, ATY1,...)


Aliases : TY1, TRX-Y1, ATY1, Solyc04g071560

Description : Y-type thioredoxin


Gene families : OG0006023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g071560.4.1

Target Alias Description ECC score Gene Family Method Actions
AT1G43560 Aty2, ty2 thioredoxin Y2 0.07 OrthoFinder output from all 47 species
Adi_g044598 TY1, TRX-Y1, ATY1 Y-type thioredoxin *(Trx-Y) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g06394 TY1, TRX-Y1, ATY1 Y-type thioredoxin *(Trx-Y) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10461 TY1, TRX-Y1, ATY1 Y-type thioredoxin *(Trx-Y) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000553.35 TY1, TRX-Y1, ATY1 Redox homeostasis.chloroplast redox homeostasis.Y-type... 0.01 OrthoFinder output from all 47 species
Dac_g24162 TY1, TRX-Y1, ATY1 Y-type thioredoxin *(Trx-Y) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034548001 TY1, TRX-Y1, ATY1 Redox homeostasis.chloroplast redox homeostasis.Y-type... 0.11 OrthoFinder output from all 47 species
LOC_Os01g73234.1 TY1, TRX-Y1,... Y-type thioredoxin 0.04 OrthoFinder output from all 47 species
Smo74205 Aty2, ty2 Redox homeostasis.chloroplast redox homeostasis.Y-type... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 69 167
No external refs found!