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  5. Solyc04g072000.4.1

Solyc04g072000.4.1 (ATEP3, EP3, CHIV,...)


Aliases : ATEP3, EP3, CHIV, ATCHITIV, Solyc04g072000

Description : Endochitinase EP3 OS=Arabidopsis thaliana (sp|q9m2u5|chi5_arath : 347.0)


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g072000.4.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00243300 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.05 OrthoFinder output from all 47 species
AMTR_s00001p00243570 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
AMTR_s00001p00243680 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AMTR_s00001p00243780 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00134660 evm_27.TU.AmTr_v1... Chitinase 10 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
AMTR_s00066p00199730 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT2G43570 CHI chitinase, putative 0.06 OrthoFinder output from all 47 species
AT2G43620 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
AT3G47540 No alias Chitinase family protein 0.05 OrthoFinder output from all 47 species
AT3G54420 ATEP3, EP3,... homolog of carrot EP3-3 chitinase 0.06 OrthoFinder output from all 47 species
AT4G01700 No alias Chitinase family protein 0.06 OrthoFinder output from all 47 species
Aev_g04564 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06392 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18092 HCHIB, B-CHI,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g38851 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36519 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48650 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02867 HCHIB, B-CHI,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g30545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32076.t1 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32079.t1 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32082.t1 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32098.t1 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32099.t1 HCHIB, B-CHI,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000746 ATEP3, EP3,... not classified & original description: CDS=491-1327 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000750 ATEP3, EP3,... not classified & original description: CDS=1-942 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000752 ATEP3, EP3,... not classified & original description: CDS=1-1347 0.02 OrthoFinder output from all 47 species
Dcu_g25280 HCHIB, B-CHI,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007191001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01038120001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_03375 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Gb_07463 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Gb_07465 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_14116 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 409.0) 0.04 OrthoFinder output from all 47 species
Gb_20764 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_20766 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Gb_20767 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Gb_29993 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Gb_29994 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 88.6) 0.07 OrthoFinder output from all 47 species
Gb_34557 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_34558 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os02g39330.1 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os03g04060.1 LOC_Os03g04060 Chitinase 11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os05g04690.1 LOC_Os05g04690 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g51050.1 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os06g51060.1 HCHIB, B-CHI,... Chitinase 1 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os10g39680.1 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os10g39700.1 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g56980 HCHIB, B-CHI,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_102538g0010 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 100.0) 0.05 OrthoFinder output from all 47 species
MA_10427514g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10430424g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_10431378g0010 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10431378g0020 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10435326g0020 ATEP3, EP3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_1327504g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_18470g0010 HCHIB, B-CHI,... Basic endochitinase C OS=Secale cereale... 0.02 OrthoFinder output from all 47 species
MA_18470g0020 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 201.0) 0.04 OrthoFinder output from all 47 species
MA_191308g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_295712g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_381956g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_44734g0010 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_5029466g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_530083g0010 HCHIB, B-CHI,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_656046g0010 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_8921185g0010 HCHIB, B-CHI,... Basic endochitinase C OS=Secale cereale... 0.05 OrthoFinder output from all 47 species
Mp4g01780.1 HCHIB, B-CHI,... Endochitinase CH5B OS=Phaseolus vulgaris... 0.04 OrthoFinder output from all 47 species
Nbi_g20262 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08746 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32706 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c16_13120V3.1 CHI, Pp3c16_13120 chitinase, putative 0.01 OrthoFinder output from all 47 species
Ppi_g06049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57704 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60891 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo138198 CHI No description available 0.03 OrthoFinder output from all 47 species
Smo426710 No alias Endochitinase A OS=Zea mays 0.03 OrthoFinder output from all 47 species
Smo446851 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.05 OrthoFinder output from all 47 species
Solyc02g082920.4.1 HCHIB, B-CHI,... Acidic 26 kDa endochitinase OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc02g082930.3.1 HCHIB, B-CHI,... Acidic 27 kDa endochitinase OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc07g009500.3.1 HEL, PR4, PR-4,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc07g009510.1.1 HEL, PR4, PR-4,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g009530.1.1 HCHIB, B-CHI,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g055810.2.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc10g055820.3.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Spa_g10007 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17832 ATEP3, EP3,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e013318_P001 HCHIB, B-CHI,... Chitinase 9 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e015056_P001 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e027534_P001 Zm00001e027534 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e030152_P001 HCHIB, B-CHI,... Basic endochitinase A OS=Secale cereale... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 77 276
IPR001002 Chitin-bd_1 30 59
No external refs found!