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  5. Solyc04g076780.4.1

Solyc04g076780.4.1 (OPT4, ATOPT4, Solyc04g076780)


Aliases : OPT4, ATOPT4, Solyc04g076780

Description : oligopeptide transporter (OPT)


Gene families : OG0000539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g076780.4.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00121820 OPT7, ATOPT7,... Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
Adi_g015089 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14987 OPT7, ATOPT7 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005133001 OPT3, ATOPT3 Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
GSVIVT01009224001 OPT4, ATOPT4 Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
GSVIVT01014724001 OPT1, ATOPT1 Solute transport.carrier-mediated transport.OPT... 0.05 OrthoFinder output from all 47 species
GSVIVT01018764001 OPT7, ATOPT7 Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
GSVIVT01038513001 OPT4, ATOPT4 Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
LOC_Os01g43940.1 OPT4, ATOPT4,... oligopeptide transporter (OPT) 0.04 OrthoFinder output from all 47 species
LOC_Os06g03700.1 OPT7, ATOPT7,... oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
Len_g55842 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
MA_132413g0010 OPT3, ATOPT3 oligopeptide transporter (OPT) 0.04 OrthoFinder output from all 47 species
MA_523740g0010 OPT7, ATOPT7 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Mp3g03750.1 ATOPT2, OPT2 oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
Mp4g06980.1 OPT7, ATOPT7 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Pir_g19153 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09570 OPT7, ATOPT7 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006522 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009089 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description:... 0.03 OrthoFinder output from all 47 species
Smo88962 OPT7, ATOPT7 Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
Spa_g09925 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g41008 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 46 717
No external refs found!