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  5. Solyc04g078720.1.1

Solyc04g078720.1.1 (Solyc04g078720)


Aliases : Solyc04g078720

Description : protease (SBT1)


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g078720.1.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00112p00083750 ALE, ALE1,... Subtilisin-like protease SBT2.4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Azfi_s3568.g116281 No alias not classified & original description: CDS=1-1296 0.02 OrthoFinder output from all 47 species
GSVIVT01027586001 ATSBT1.1, SBTI1.1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01027591001 ATSBT1.1, SBTI1.1 Subtilisin-like protease SBT1.1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g17150.1 LOC_Os02g17150 Subtilisin-like protease SBT3.8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g53860.1 LOC_Os02g53860 protease (SBT1) 0.04 OrthoFinder output from all 47 species
LOC_Os04g03796.1 LOC_Os04g03796 Subtilisin-like protease SBT3.8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g53915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435997g0010 ARA12 Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g14980.1 AIR3 Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g021220.1.1 Solyc02g021220 protease (SBT1) 0.04 OrthoFinder output from all 47 species
Solyc02g092680.1.1 ARA12, Solyc02g092680 protease (SBT1) 0.03 OrthoFinder output from all 47 species
Solyc03g078200.3.1 ALE, ALE1, Solyc03g078200 protease (SBT2) 0.04 OrthoFinder output from all 47 species
Solyc04g078730.1.1 Solyc04g078730 protease (SBT1) 0.03 OrthoFinder output from all 47 species
Solyc08g007610.1.1 ARA12, Solyc08g007610 Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc10g085530.1.1 ARA12, Solyc10g085530 Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g085540.1.1 Solyc10g085540 Subtilisin-like protease SBT1.8 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR010259 S8pro/Inhibitor_I9 8 80
IPR000209 Peptidase_S8/S53_dom 104 538
IPR041469 Subtilisin-like_FN3 615 717
No external refs found!