Aliases : Solyc04g082240
Description : no hits & (original description: none)
Gene families : OG0003052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003052_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g082240.1.1 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G17070 | No alias | Arabidopsis protein of unknown function (DUF241) | 0.03 | OrthoFinder output from all 47 species | |
| AT2G17080 | No alias | Arabidopsis protein of unknown function (DUF241) | 0.03 | OrthoFinder output from all 47 species | |
| AT4G35200 | No alias | Arabidopsis protein of unknown function (DUF241) | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01004309001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01004310001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007245001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g43800.1 | LOC_Os08g43800 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g43860.1 | LOC_Os08g43860 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g43920.1 | LOC_Os08g43920 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g082980.1.1 | Solyc02g082980 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g083050.1.1 | Solyc02g083050 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g083090.1.1 | Solyc02g083090 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003978_P001 | Zm00001e003978 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021827_P001 | Zm00001e021827 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034937_P001 | Zm00001e034937 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004320 | BPS1_pln | 6 | 227 |
| No external refs found! |
