Solyc05g006620.3.1 (Solyc05g006620)

Aliases : Solyc05g006620

Description : effector receptor (NLR)

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g006620.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00250200	evm_27.TU.AmTr_v1...	Disease resistance protein TAO1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00052p00159410	evm_27.TU.AmTr_v1...	External stimuli response.biotic stress.pathogen...	0.06	OrthoFinder output from all 47 species
AT1G66090	No alias	Disease resistance protein (TIR-NBS class)	0.03	OrthoFinder output from all 47 species
AT1G72920	No alias	Toll-Interleukin-Resistance (TIR) domain family protein	0.04	OrthoFinder output from all 47 species
Gb_17461	No alias	effector receptor (NLR)	0.02	OrthoFinder output from all 47 species
Gb_29198	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.02	OrthoFinder output from all 47 species
Solyc02g032650.3.1	Solyc02g032650	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	193	416
IPR000157	TIR_dom	20	180

External Links

No external refs found!