Aliases : CDC48B, Solyc05g012190
Description : Cell division control protein 48 homolog B OS=Arabidopsis thaliana (sp|q9zpr1|cd48b_arath : 724.0)
Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00154p00076410 | CDC48B,... | Cell division control protein 48 homolog B... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G03670 | CDC48B | cell division cycle 48B | 0.03 | OrthoFinder output from all 47 species | |
| AT3G01610 | emb1354, CDC48C | cell division cycle 48C | 0.05 | OrthoFinder output from all 47 species | |
| AT3G56690 | CIP111 | Cam interacting protein 111 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g003343 | CDC48B | platform ATPase CDC48 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g054679 | emb1354, CDC48C | platform ATPase CDC48 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g080379 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02580 | CDC48B | platform ATPase CDC48 & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0074.g037436 | CIP111 | not classified & original description: CDS=701-3814 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g77518 | No alias | platform ATPase CDC48 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.16G061700.1 | emb1354, CDC48C,... | platform ATPase CDC48 & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000525.10 | emb1354, CDC48C | Cell division control protein 48 homolog C... | 0.01 | OrthoFinder output from all 47 species | |
| Cre09.g398550 | emb1354, CDC48C | Cell division control protein 48 homolog C... | 0.01 | OrthoFinder output from all 47 species | |
| Cre17.g700300 | CDC48B | Cell division control protein 48 homolog B... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04096 | CIP111 | platform ATPase CDC48 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03992 | emb1354, CDC48C | platform ATPase CDC48 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09095 | CDC48B | platform ATPase CDC48 & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g01980.1 | emb1354, CDC48C,... | Cell division control protein 48 homolog C... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g11340.1 | CIP111, LOC_Os11g11340 | Calmodulin-interacting protein 111 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g22643 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g13350.1 | CIP111 | Calmodulin-interacting protein 111 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g20500.1 | CDC48B | Cell division control protein 48 homolog B... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01985 | No alias | platform ATPase CDC48 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53020 | emb1354, CDC48C | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13901 | No alias | platform ATPase CDC48 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25222 | No alias | platform ATPase CDC48 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo173081 | CDC48B | Cell division control protein 48 homolog B... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04738 | emb1354, CDC48C | platform ATPase CDC48 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021405_P001 | CIP111, Zm00001e021405 | Calmodulin-interacting protein 111 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e035514_P002 | emb1354, CDC48C,... | Cell division control protein 48 homolog C... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e036688_P001 | emb1354, CDC48C,... | Cell division control protein 48 homolog C... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |
