Solyc05g013460.4.1 (RSH2, Solyc05g013460)


Aliases : RSH2, Solyc05g013460

Description : metabolite transporter (DTX)


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g013460.4.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene24726.t1 Aspi01Gene24726 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45654.t1 Aspi01Gene45654 metabolite transporter *(DTX) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.13G089800.1 Ceric.13G089800 metabolite transporter *(DTX) & original description:... 0.04 OrthoFinder output from all 47 species
Cre10.g444900 No alias Solute transport.carrier-mediated transport.MOP... 0.01 OrthoFinder output from all 47 species
Dde_g17514 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57573 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
MA_253593g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Ore_g03176 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015885 No alias metabolite transporter *(DTX) & original description: CDS=1-1521 0.02 OrthoFinder output from all 47 species
Solyc04g074840.3.1 Solyc04g074840 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Solyc04g074850.3.1 Solyc04g074850 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Zm00001e004876_P001 Zm00001e004876 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 69 228
IPR002528 MATE_fam 290 451
No external refs found!