Solyc05g014830.3.1 (HTA2, Solyc05g014830)

Aliases : HTA2, Solyc05g014830

Description : histone (H2A)

Gene families : OG0016453 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016453_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g014830.3.1
Cluster	HCCA: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc05g014870.3.1	HTA2, Solyc05g014870	histone (H2A)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	92	125
IPR032454	Histone_H2A_C	249	282
IPR007125	Histone_H2A/H2B/H3	12	89
IPR007125	Histone_H2A/H2B/H3	179	246

External Links

No external refs found!