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  5. Solyc05g018590.3.1

Solyc05g018590.3.1 (ATSUG1, RPT6A, Solyc05g018590)


Aliases : ATSUG1, RPT6A, Solyc05g018590

Description : regulatory component RPT6 of 26S proteasome


Gene families : OG0004338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g018590.3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G19990 ATSUG1, RPT6A regulatory particle triple-A ATPase 6A 0.03 OrthoFinder output from all 47 species
AT5G20000 No alias AAA-type ATPase family protein 0.07 OrthoFinder output from all 47 species
Ceric.37G056200.1 ATSUG1, RPT6A,... regulatory component *(RPT6) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000792.28 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.07 OrthoFinder output from all 47 species
Cre04.g216600 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.08 OrthoFinder output from all 47 species
Dcu_g04554 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.1 OrthoFinder output from all 47 species
GSVIVT01017222001 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
GSVIVT01035767001 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species
Gb_08346 ATSUG1, RPT6A regulatory component RPT6 of 26S proteasome 0.02 OrthoFinder output from all 47 species
LOC_Os02g11050.1 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.12 OrthoFinder output from all 47 species
Len_g15696 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Mp1g04290.1 ATSUG1, RPT6A regulatory component RPT6 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Msp_g06734 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ppi_g17194 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Sam_g13407 No alias regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Smo441130 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Spa_g16959 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Zm00001e014515_P001 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Zm00001e024980_P001 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004594 pantothenate kinase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 196 329
IPR032501 Prot_ATP_ID_OB_C 83 138
IPR041569 AAA_lid_3 353 395
No external refs found!