Solyc05g032770.4.1 (AL5, Solyc05g032770)

Aliases : AL5, Solyc05g032770

Description : Alfin-like transcription factor

Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g032770.4.1
Cluster	HCCA: Cluster_151

Target	Alias	Description	ECC score	Gene Family Method
Adi_g023739	AL5	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Cre10.g441050	AL1	RNA biosynthesis.transcriptional activation.Alfin-like...	0.02	OrthoFinder output from all 47 species
LOC_Os11g14010.1	AL7, LOC_Os11g14010	Alfin-like transcription factor	0.03	OrthoFinder output from all 47 species
Len_g21941	AL1	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Pnu_g06791	AL5	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	HCCA
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0009452	7-methylguanosine RNA capping	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0036260	RNA capping	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021998	Alfin_N	11	138

External Links

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