Solyc05g048820.3.1 (Solyc05g048820)


Aliases : Solyc05g048820

Description : Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 94.0)


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g048820.3.1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00257810 evm_27.TU.AmTr_v1... Remorin OS=Solanum tuberosum 0.05 OrthoFinder output from all 47 species
AT3G61260 No alias Remorin family protein 0.03 OrthoFinder output from all 47 species
AT5G23750 No alias Remorin family protein 0.03 OrthoFinder output from all 47 species
Adi_g117288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40812.t1 Aspi01Gene40812 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G045700.1 Ceric.06G045700 not classified & original description: pacid=50619672... 0.02 OrthoFinder output from all 47 species
Ceric.11G018300.1 Ceric.11G018300 not classified & original description: pacid=50595329... 0.03 OrthoFinder output from all 47 species
Ceric.35G046700.1 Ceric.35G046700 not classified & original description: pacid=50581722... 0.03 OrthoFinder output from all 47 species
Dcu_g02391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
Gb_30703 No alias Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 83.2) 0.02 OrthoFinder output from all 47 species
Len_g05082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005937 No alias not classified & original description: CDS=1-372 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016629 No alias not classified & original description: CDS=385-969 0.03 OrthoFinder output from all 47 species
Spa_g47427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015240_P001 Zm00001e015240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
InterPro domains Description Start Stop
IPR005518 Remorin_N 7 38
IPR005516 Remorin_C 42 147
No external refs found!