Solyc05g050390.4.1 (AtBECLIN1, ATATG6,...)


Aliases : AtBECLIN1, ATATG6, ATG6, BECLIN1, Solyc05g050390

Description : regulatory component VPS30/ATG6 of PI3-kinase vesicle nucleation complex I/II


Gene families : OG0004790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004790_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g050390.4.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g05440 AtBECLIN1,... regulatory component *(VPS30/ATG6) of PI3-kinase vesicle... 0.02 OrthoFinder output from all 47 species
Ala_g01946 AtBECLIN1,... regulatory component *(VPS30/ATG6) of PI3-kinase vesicle... 0.02 OrthoFinder output from all 47 species
Cre01.g020264 AtBECLIN1,... Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.03 OrthoFinder output from all 47 species
GSVIVT01027092001 AtBECLIN1,... Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.06 OrthoFinder output from all 47 species
LOC_Os03g44200.1 AtBECLIN1,... regulatory component VPS30/ATG6 of PI3-kinase vesicle... 0.06 OrthoFinder output from all 47 species
Pir_g19803 AtBECLIN1,... regulatory component *(VPS30/ATG6) of PI3-kinase vesicle... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013032 AtBECLIN1,... regulatory component *(VPS30/ATG6) of PI3-kinase vesicle... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR040455 Atg6_BARA 310 485
IPR041691 Atg6/beclin_CC 179 307
No external refs found!