Solyc05g051380.4.1 (PLT3, AIL6, Solyc05g051380)

Aliases : PLT3, AIL6, Solyc05g051380

Description : transcription factor (AP2)

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g051380.4.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00225230	AIL5, EMK, CHO1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	OrthoFinder output from all 47 species
AMTR_s00065p00077750	DRG, CKC, CKC1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AT1G72570	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT4G37750	DRG, CKC, CKC1, ANT	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
Aev_g39456	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Als_g14196	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Als_g14935	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Als_g47612	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aop_g07593	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene18157.t1	Aspi01Gene18157	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.03G029300.1	BBM, Ceric.03G029300	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ceric.03G054600.1	ADAP, Ceric.03G054600	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.10G056200.1	PLT2, Ceric.10G056200	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ceric.12G002600.1	Ceric.12G002600	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ceric.13G003200.1	RAP2.7, TOE1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.26G003300.1	PLT2, Ceric.26G003300	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ceric.31G036600.1	Ceric.31G036600	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Cre08.g385350	HRE1	No description available	0.05	OrthoFinder output from all 47 species
GSVIVT01016097001	ADAP	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	OrthoFinder output from all 47 species
GSVIVT01029219001	AIL5, EMK, CHO1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
LOC_Os01g67410.1	PLT1, LOC_Os01g67410	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os02g40070.1	PLT2, LOC_Os02g40070	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os03g19900.1	AIL7, LOC_Os03g19900	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os03g56050.1	DRG, CKC, CKC1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os06g44750.1	AIL5, EMK, CHO1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os07g03250.1	DRG, CKC, CKC1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os08g34360.1	LOC_Os08g34360	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Len_g55462	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_196219g0010	AIL5, EMK, CHO1	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
MA_98095g0010	No alias	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Mp8g11450.1	No alias	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Msp_g31091	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ore_g26599	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ore_g27835	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ore_g36760	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Pnu_g21617	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Solyc02g092050.3.1	DRG, CKC, CKC1,...	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Solyc03g044300.3.1	AP2, FLO2, FL1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Solyc04g077490.3.1	DRG, CKC, CKC1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Solyc11g008560.2.1	BBM, Solyc11g008560	transcription factor (AP2)	0.05	OrthoFinder output from all 47 species
Solyc11g010710.2.1	PLT3, AIL6,...	transcription factor (AP2)	0.05	OrthoFinder output from all 47 species
Solyc11g061750.2.1	PLT2, Solyc11g061750	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Spa_g13908	No alias	RAM1-dependent transcription factor *(WRI5) & original...	0.05	OrthoFinder output from all 47 species
Tin_g10618	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e005817_P003	DRG, CKC, CKC1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Zm00001e011539_P001	DRG, CKC, CKC1,...	transcription factor (AP2)	0.05	OrthoFinder output from all 47 species
Zm00001e037501_P005	AP2, FLO2, FL1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	222	277
IPR001471	AP2/ERF_dom	322	371

External Links

No external refs found!

Solyc05g051380.4.1 (PLT3, AIL6, Solyc05g051380)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation