Solyc05g052110.3.1 (Solyc05g052110)

Aliases : Solyc05g052110

Description : pectin methylesterase

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g052110.3.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G69940	ATPPME1, PPME1	Pectin lyase-like superfamily protein	0.02	OrthoFinder output from all 47 species
AT5G07430	No alias	Pectin lyase-like superfamily protein	0.02	OrthoFinder output from all 47 species
Adi_g105814	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g32641	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g01243	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.03G008900.1	Ceric.03G008900	pectin methylesterase & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.29G054600.1	Ceric.29G054600	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.36G035900.1	Ceric.36G035900	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g20873	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Gb_17798	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
MA_304854g0010	ATPE11, PE11	pectin methylesterase	0.02	OrthoFinder output from all 47 species
MA_62865g0010	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010557	No alias	pectin methylesterase & original description: CDS=267-1394	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	73	358

External Links

No external refs found!