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  5. Solyc05g053370.3.1

Solyc05g053370.3.1 (ATZIP6, ZIP6, Solyc05g053370)


Aliases : ATZIP6, ZIP6, Solyc05g053370

Description : metal cation transporter (ZIP)


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g053370.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00182180 ATIRT1, IRT1,... Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
AT2G30080 ATZIP6, ZIP6 ZIP metal ion transporter family 0.06 OrthoFinder output from all 47 species
AT2G32270 ZIP3 zinc transporter 3 precursor 0.03 OrthoFinder output from all 47 species
AT3G12750 ZIP1 zinc transporter 1 precursor 0.05 OrthoFinder output from all 47 species
AT4G19680 IRT2, ATIRT2 iron regulated transporter 2 0.04 OrthoFinder output from all 47 species
AT4G19690 ATIRT1, IRT1 iron-regulated transporter 1 0.08 OrthoFinder output from all 47 species
Adi_g079780 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23170 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00742 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27419.t1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013568 ZIP1 metal cation transporter *(ZIP) & original description: CDS=1-972 0.03 OrthoFinder output from all 47 species
Ceric.03G008200.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g13090 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35439 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00948 ZIP10 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01101 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06502 ZIP10 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Gb_39061 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
Gb_39062 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
LOC_Os03g46470.1 ZIP10, LOC_Os03g46470 metal cation transporter (ZIP) 0.08 OrthoFinder output from all 47 species
LOC_Os04g52310.1 ZIP1, LOC_Os04g52310 metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
LOC_Os05g10940.1 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
LOC_Os07g12890.1 ZIP1, LOC_Os07g12890 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
MA_6126514g0010 ZIP1 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Nbi_g10068 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10666 IRT3, ATIRT3 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17001 No alias metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo91749 ZIP1 Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
Solyc02g069190.4.1 ZIP10, Solyc02g069190 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Solyc02g069200.3.1 ATIRT1, IRT1,... metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
Solyc08g065190.3.1 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Zm00001e005195_P002 ZIP10, Zm00001e005195 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e006961_P001 ZIP1, Zm00001e006961 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e031884_P002 ZIP1, Zm00001e031884 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e033157_P001 ZIP5, Zm00001e033157 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003689 ZIP 23 325
No external refs found!