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  5. Solyc05g055660.3.1

Solyc05g055660.3.1 (FT, Solyc05g055660)


Aliases : FT, Solyc05g055660

Description : PEB protein-dependent signalling regulatory protein (PEBP)


Gene families : OG0000434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000434_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055660.3.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00114p00070400 ATC,... CEN-like protein 2 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
AT1G18100 E12A11, MFT PEBP (phosphatidylethanolamine-binding protein) family protein 0.04 OrthoFinder output from all 47 species
AT2G27550 ATC centroradialis 0.03 OrthoFinder output from all 47 species
Ceric.06G045500.1 Ceric.06G045500 not classified & original description: pacid=50620154... 0.03 OrthoFinder output from all 47 species
Ceric.19G003400.1 E12A11, MFT,... not classified & original description: pacid=50576006... 0.04 OrthoFinder output from all 47 species
Ceric.22G072400.1 Ceric.22G072400 not classified & original description: pacid=50615120... 0.02 OrthoFinder output from all 47 species
Ceric.22G072600.1 Ceric.22G072600 not classified & original description: pacid=50614502... 0.03 OrthoFinder output from all 47 species
Ceric.34G007800.1 Ceric.34G007800 not classified & original description: pacid=50623830... 0.03 OrthoFinder output from all 47 species
Dcu_g12975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46769 FT not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036145001 ATC CEN-like protein 2 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Gb_17505 FT PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
LOC_Os01g02120.1 E12A11, MFT,... PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
LOC_Os01g54490.1 FT, LOC_Os01g54490 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Len_g14529 E12A11, MFT not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10997 E12A11, MFT not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16396 FT not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g58271 FT not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011038 No alias not classified & original description: CDS=449-1135 0.02 OrthoFinder output from all 47 species
Sam_g01279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g079290.3.1 E12A11, MFT,... PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Tin_g35798 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g40601 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g45908 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e008880_P001 TSF, Zm00001e008880 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Zm00001e019815_P001 FT, Zm00001e019815 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Zm00001e026057_P001 FT, Zm00001e026057 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Zm00001e032156_P001 FT, Zm00001e032156 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008914 PEBP 60 125
No external refs found!