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  5. Solyc05g056120.3.1

Solyc05g056120.3.1 (BME3-ZF, BME3, GATA8,...)


Aliases : BME3-ZF, BME3, GATA8, Solyc05g056120

Description : transcription factor (GATA)


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g056120.3.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00112210 GATA1,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00080350 GATA9,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AMTR_s00148p00049970 BME3-ZF, BME3,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AT3G54810 BME3-ZF, BME3, GATA8 Plant-specific GATA-type zinc finger transcription... 0.07 OrthoFinder output from all 47 species
AT4G32890 GATA9 GATA transcription factor 9 0.03 OrthoFinder output from all 47 species
Adi_g016252 GATA4 transcription factor *(A/B-GATA) & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g021303 GATA4 transcription factor *(A/B-GATA) & original description: none 0.1 OrthoFinder output from all 47 species
Adi_g022369 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035600 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036776 GATA5 transcription factor *(A/B-GATA) & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g058312 GATA4 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g067935 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082687 GATA5 transcription factor *(A/B-GATA) & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g098113 No alias transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108833 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116352 GATA12 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g01113 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02207 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03153 GATA5 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g16772 GATA9 transcription factor *(A/B-GATA) & original description: none 0.09 OrthoFinder output from all 47 species
Aev_g17183 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32134 GATA5 transcription factor *(A/B-GATA) & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g09430 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13178 GATA12 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13992 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32827 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00831 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04337 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07273 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11283 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20978 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38669 GATA2 transcription factor *(A/B-GATA) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g43029 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48787 GATA12 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g48899 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52135 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23859 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12583 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g62121 GATA12 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene07249.t1 GATA9, Aspi01Gene07249 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene30025.t1 GATA5, Aspi01Gene30025 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33196.t1 GATA12, Aspi01Gene33196 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g031150 GATA5 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0078.g038241 GATA4 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s1514.g103937 GATA20 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g02619 GATA2 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05175 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38063 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G090400.1 GATA12, Ceric.01G090400 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.07G000700.1 GATA12, Ceric.07G000700 transcription factor *(A/B-GATA) & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.07G063400.1 GATA12, Ceric.07G063400 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G072600.1 GATA9, Ceric.07G072600 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G054000.1 GATA5, Ceric.17G054000 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G025900.1 GATA9, Ceric.25G025900 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G027400.1 GATA12, Ceric.27G027400 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g06612 GATA9 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g10781 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23014 GATA4 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06887 GATA2 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07436 GATA9 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g15306 GATA9 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15717 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22871 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g34018 GATA12 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47461 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05496 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06344 GATA5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06602 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06867 GATA9 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g08197 GATA1 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08339 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20942 GATA15 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26522 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26857 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016265001 BME3-ZF, BME3, GATA8 GATA transcription factor 8 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
GSVIVT01018833001 GATA5 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01033385001 GATA9 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01035614001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Gb_13387 GATA9 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Gb_24250 GATA9 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Gb_24639 GATA4 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Gb_25568 GATA20 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Gb_34837 GATA20 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45650.2 GATA5, LOC_Os04g45650 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
LOC_Os05g44400.1 GATA12, LOC_Os05g44400 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49280.1 GATA20, LOC_Os05g49280 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os10g32070.1 GATA1, LOC_Os10g32070 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os10g40810.1 GATA2, LOC_Os10g40810 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
LOC_Os12g07120.1 GATA14, LOC_Os12g07120 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Len_g05301 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08386 GATA12 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g24180 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03183 GATA4 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
MA_18616g0010 GATA9 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Mp1g03950.1 GATA9 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Msp_g15986 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48249 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02094 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13065 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22942 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26719 GATA9 transcription factor *(A/B-GATA) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g30519 GATA2 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40724 GATA9 transcription factor *(A/B-GATA) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14533 GATA9 transcription factor *(A/B-GATA) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g25101 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44466 GATA1 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17490 GATA12 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22180 GATA9 transcription factor *(A/B-GATA) & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g30108 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009072 GATA4 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011193 GATA2 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015917 GNC, GATA21 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016909 GATA9 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023073 GATA9 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g13371 No alias transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g060490.4.1 GATA17, Solyc01g060490 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc02g085190.2.1 HAN, MNP,... transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
Solyc05g053500.4.1 GATA1, Solyc05g053500 transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
Spa_g16103 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30606 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03941 GATA9 transcription factor *(A/B-GATA) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e005940_P001 GATA4, Zm00001e005940 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e015260_P001 GATA5, Zm00001e015260 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e016165_P001 BME3-ZF, BME3,... transcription factor (GATA) 0.07 OrthoFinder output from all 47 species
Zm00001e023650_P003 BME3-ZF, BME3,... transcription factor (GATA) 0.06 OrthoFinder output from all 47 species
Zm00001e026256_P001 GATA23, Zm00001e026256 transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
Zm00001e026601_P001 GATA20, Zm00001e026601 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e037876_P002 GATA4, Zm00001e037876 transcription factor (GATA) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 229 262
No external refs found!