Solyc05g056410.1.1 (Solyc05g056410)

Aliases : Solyc05g056410

Description : transcription factor (DOG)

Gene families : OG0001119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001119_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g056410.1.1
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00130p00113960	ZW2,...	RNA biosynthesis.transcriptional activation.bZIP...	0.03	OrthoFinder output from all 47 species
AT4G18650	No alias	transcription factor-related	0.06	OrthoFinder output from all 47 species
AT4G18660	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.02	OrthoFinder output from all 47 species
AT4G18680	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.03	OrthoFinder output from all 47 species
AT4G18690	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.04	OrthoFinder output from all 47 species
Ala_g07838	No alias	DOG-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.20G064500.1	TGA5, OBF5,...	DOG-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g11014	No alias	DOG-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g24749	No alias	DOG-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os05g48650.1	LOC_Os05g48650	transcription factor (DOG)	0.05	OrthoFinder output from all 47 species
Lfl_g01120	No alias	DOG-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Pnu_g27300	No alias	DOG-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g25372	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g073570.1.1	Solyc02g073570	transcription factor (DOG)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025422	TGA_domain	26	103

External Links

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Solyc05g056410.1.1 (Solyc05g056410)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation