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  5. Solyc06g005480.3.1

Solyc06g005480.3.1 (Solyc06g005480)


Aliases : Solyc06g005480

Description : no hits & (original description: none)


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g005480.3.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269120 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AT2G39650 No alias Protein of unknown function (DUF506) 0.03 OrthoFinder output from all 47 species
Adi_g056039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g31928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0035.g025546 No alias not classified & original description: CDS=508-1674 0.05 OrthoFinder output from all 47 species
Azfi_s0038.g026352 No alias not classified & original description: CDS=79-1266 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043558 No alias not classified & original description: CDS=525-2087 0.02 OrthoFinder output from all 47 species
Ceric.01G086500.1 Ceric.01G086500 not classified & original description: pacid=50591937... 0.03 OrthoFinder output from all 47 species
Ceric.01G087300.1 Ceric.01G087300 not classified & original description: pacid=50591762... 0.04 OrthoFinder output from all 47 species
Ceric.01G087400.1 Ceric.01G087400 not classified & original description: pacid=50590838... 0.02 OrthoFinder output from all 47 species
Dac_g04659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030534001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_09444 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_28132 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30160 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g28210.1 LOC_Os10g28210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g25020.1 LOC_Os11g25020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g09336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_32290g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g22303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008363 No alias not classified & original description: CDS=285-1409 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014461 No alias not classified & original description: CDS=1-1647 0.02 OrthoFinder output from all 47 species
Sam_g40584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g053900.2.1 Solyc07g053900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g082980.3.1 Solyc09g082980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g41694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005992_P006 Zm00001e005992 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019800_P002 Zm00001e019800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 44 248
No external refs found!