Aliases : ATEXPA4, ATEXP4, EXPA4, ATHEXP ALPHA 1.6, Solyc06g005560
Description : alpha-class expansin
Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00270650 | ATEXPA11, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00264980 | ATEXPA1, EXP1,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00077p00060330 | EXPA8, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | OrthoFinder output from all 47 species | |
| AT1G69530 | ATEXPA1, EXP1,... | expansin A1 | 0.04 | OrthoFinder output from all 47 species | |
| AT2G28950 | EXPA6, ATEXP6,... | expansin A6 | 0.05 | OrthoFinder output from all 47 species | |
| AT2G37640 | ATEXPA3, EXP3,... | Barwin-like endoglucanases superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G45960 | ATEXLA3, EXPL3,... | expansin-like A3 | 0.05 | OrthoFinder output from all 47 species | |
| AT4G38210 | ATEXPA20,... | expansin A20 | 0.07 | OrthoFinder output from all 47 species | |
| Als_g02221 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g03581 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g11063 | EXPA16, ATHEXP... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g14978 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g19093 | No alias | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07936 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g30155 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene00363.t1 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14225.t1 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14337.t1 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene40383.t1 | EXPA2, ATHEXP... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0112.g045819 | No alias | alpha-class expansin & original description: CDS=122-925 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0206.g057815 | EXPA16, ATHEXP... | alpha-class expansin & original description: CDS=254-1036 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g03639 | ATEXPA10,... | alpha-class expansin & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g08546 | No alias | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g10427 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G056900.1 | EXPA2, ATHEXP... | alpha-class expansin & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.06G057000.1 | EXPA2, ATHEXP... | alpha-class expansin & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.06G060200.1 | EXPB1, ATEXPB1,... | not classified & original description: pacid=50620745... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z063100.1 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G046400.1 | EXPA16, ATHEXP... | alpha-class expansin & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.37G054100.1 | ATEXPA3, EXP3,... | alpha-class expansin & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15716 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16853 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g22602 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g02593 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g11792 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g19493 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g30424 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016525001 | ATEXPA4, ATEXP4,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01024946001 | ATEXPA4, ATEXP4,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01028215001 | ATHEXP ALPHA... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.07 | OrthoFinder output from all 47 species | |
| Gb_29324 | ATEXLA1, EXPL1,... | alpha-like-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g16730.1 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g42650.1 | EXPB3, ATEXPB3,... | beta-class expansin | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g21820.1 | EXPA8, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g44780.1 | EXPB3, ATEXPB3,... | Expansin-B17 OS=Oryza sativa subsp. japonica... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g46630.1 | LOC_Os04g46630 | Expansin-B15 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g15690.1 | ATHEXP BETA 1.4,... | Expansin-B18 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g41700.1 | ATEXPA20,... | alpha-class expansin | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g39640.1 | ATEXLA1, EXPL1,... | alpha-like-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g40700.1 | ATHEXP BETA 1.4,... | Expansin-B6 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g15335 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g39394 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_104065g0020 | ATEXPA3, EXP3,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| MA_41212g0010 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.04 | OrthoFinder output from all 47 species | |
| MA_91602g0010 | EXPA8, ATHEXP... | Expansin-A2 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g09650.1 | EXPA6, ATEXP6,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10827 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23319 | EXPA16, ATHEXP... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g44001 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g02838 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32028 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000532 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: CDS=37-810 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006211 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: CDS=682-1482 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0023.g008752 | EXPA2, ATHEXP... | alpha-class expansin & original description: CDS=10-789 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0034.g011304 | EXPA8, ATHEXP... | alpha-class expansin & original description: CDS=181-945 | 0.02 | OrthoFinder output from all 47 species | |
| Smo230202 | EXPA2, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g115270.3.1 | ATHEXP ALPHA ... | alpha-class expansin | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g076220.3.1 | EXPA6, ATEXP6,... | alpha-class expansin | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g11698 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12972 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54039 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06848 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14286 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004713_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e004714_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004716_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005019_P001 | ATHEXP BETA 1.4,... | Expansin-B12 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005020_P003 | ATHEXP BETA 1.4,... | Expansin-B12 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019433_P001 | ATEXPA1, EXP1,... | alpha-class expansin | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e033407_P001 | ATHEXP BETA 1.1,... | Expansin-B11 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e036907_P001 | ATHEXP BETA 1.4,... | Putative expansin-B14 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037578_P001 | ATEXPA20,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037879_P001 | ATHEXP BETA 1.4,... | Expansin-B3 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037885_P001 | ATHEXP BETA 1.4,... | Expansin-B6 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038997_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e040578_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| No external refs found! |
