Solyc06g016770.3.1 (Solyc06g016770)


Aliases : Solyc06g016770

Description : RING-v-class E3 ligase


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g016770.3.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g08919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021241001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g06920.2 LOC_Os02g06920 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_352312g0010 No alias RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Mp7g19060.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g15096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 266 313
No external refs found!