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  5. Solyc06g062460.3.1

Solyc06g062460.3.1 (Solyc06g062460)


Aliases : Solyc06g062460

Description : transcription factor (bHLH)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g062460.3.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00138470 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.03 OrthoFinder output from all 47 species
Aop_g01760 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08607 HEC1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g18078 HEC2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31539 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G046500.1 SPT, Ceric.13G046500 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g08111 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008093001 No alias External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
GSVIVT01020121001 No alias External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
LOC_Os08g39630.1 LOC_Os08g39630 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os12g40590.1 SPT, LOC_Os12g40590 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Lfl_g03405 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30069 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10344244g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g11113 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24696 HEC1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g42257 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Nbi_g16867 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29044 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ore_g42033 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Pnu_g05843 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013028 No alias bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Smo118904 ALC RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Spa_g19017 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21312 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023698_P001 LRL3, Zm00001e023698 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 294 335
No external refs found!