Solyc06g065670.4.1 (PDR4, ATPDR4, Solyc06g065670)

Aliases : PDR4, ATPDR4, Solyc06g065670

Description : cuticular lipid exporter (PEC1). subfamily ABCG transporter

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g065670.4.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00097650	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00039p00224920	PIS1, ABCG37,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00122p00085720	PDR4, ATPDR4,...	Solute transport.primary active transport.ABC...	0.07	OrthoFinder output from all 47 species
AT1G15210	ATPDR7, PDR7	pleiotropic drug resistance 7	0.03	OrthoFinder output from all 47 species
AT1G66950	PDR11, ATPDR11	pleiotropic drug resistance 11	0.04	OrthoFinder output from all 47 species
AT2G26910	PDR4, ATPDR4	pleiotropic drug resistance 4	0.15	OrthoFinder output from all 47 species
AT2G37280	ATPDR5, PDR5	pleiotropic drug resistance 5	0.05	OrthoFinder output from all 47 species
AT3G53480	PIS1, ABCG37,...	pleiotropic drug resistance 9	0.04	OrthoFinder output from all 47 species
AT4G15230	ATPDR2, PDR2	pleiotropic drug resistance 2	0.04	OrthoFinder output from all 47 species
Adi_g035578	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g16443	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g27487	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g47419	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g03117	ABCG40, PDR12,...	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Aop_g06778	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.08	OrthoFinder output from all 47 species
Aop_g18617	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g36836	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g37088	PDR11, ATPDR11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene01667.t1	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene02114.t4	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene02115.t1	ATPDR7, PDR7,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene28061.t1	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28063.t2	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g10025	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.07	OrthoFinder output from all 47 species
Ceric.12G068500.1	ABCG40, PDR12,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Cre17.g728400	PEN3, ABCG36,...	Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum	0.02	OrthoFinder output from all 47 species
Dac_g38790	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g29011	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g28400	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01015456001	PDR4, ATPDR4	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01016993001	ATPDR7, PDR7	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01016998001	PDR1, ATPDR1	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01017202001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
GSVIVT01017337001	ABCG40, PDR12,...	ABC transporter G family member 40 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01031314001	PIS1, ABCG37,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01035715001	PDR4, ATPDR4	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_33043	ABCG40, PDR12,...	subfamily ABCG transporter	0.06	OrthoFinder output from all 47 species
Gb_34309	ATPDR3, PDR3	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Gb_34310	ATPDR3, PDR3	ABC transporter G family member 31 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Gb_34645	PDR4, ATPDR4	subfamily ABCG transporter	0.16	OrthoFinder output from all 47 species
Gb_34646	PDR4, ATPDR4	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g08260.1	PDR4, ATPDR4,...	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
LOC_Os01g42350.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
LOC_Os02g11760.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
LOC_Os02g32690.1	PIS1, ABCG37,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os09g16330.2	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Len_g12160	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g35920	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
MA_10348400g0010	PDR1, ATPDR1	ABC transporter G family member 29 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10426781g0010	PDR4, ATPDR4	subfamily ABCG transporter	0.09	OrthoFinder output from all 47 species
MA_10437002g0020	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_10437197g0020	PDR6, ATPDR6	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
MA_12965g0010	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_135152g0010	PEN3, ABCG36,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
MA_17319g0020	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_2168g0010	PDR4, ATPDR4	ABC transporter G family member 44 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
MA_3894g0010	PEN3, ABCG36,...	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
MA_84624g0010	ATPDR7, PDR7	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_911577g0010	PDR1, ATPDR1	ABC transporter G family member 36 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp2g21800.1	PEN3, ABCG36,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Msp_g25775	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g38848	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g04228	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g05895	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.07	OrthoFinder output from all 47 species
Nbi_g06663	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g11856	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g04816	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g08076	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11416	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14833	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g28590	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g57035	PDR6, ATPDR6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g40989	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g59241	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004775	PDR6, ATPDR6	subfamily ABCG transporter & original description: CDS=697-5283	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004796	PDR6, ATPDR6	subfamily ABCG transporter & original description: CDS=1-4422	0.04	OrthoFinder output from all 47 species
Smo115821	PEN3, ABCG36,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc12g019640.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Solyc12g100190.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.07	OrthoFinder output from all 47 species
Spa_g30595	ABCG40, PDR12,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g02910	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.09	OrthoFinder output from all 47 species
Tin_g12264	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g20998	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e006460_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e016714_P002	PDR4, ATPDR4,...	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.09	OrthoFinder output from all 47 species
Zm00001e024257_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e040575_P001	PDR6, ATPDR6,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	1132	1344
IPR013525	ABC_2_trans	477	688
IPR003439	ABC_transporter-like_ATP-bd	142	323
IPR029481	ABC_trans_N	68	117
IPR013581	PDR_assoc	693	755
IPR003439	ABC_transporter-like_ATP-bd	835	986

External Links

No external refs found!

Solyc06g065670.4.1 (PDR4, ATPDR4, Solyc06g065670)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation