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  5. Solyc06g068610.3.1

Solyc06g068610.3.1 (Solyc06g068610)


Aliases : Solyc06g068610

Description : component ADA1 of SAGA transcription co-activator complex


Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g068610.3.1

Target Alias Description ECC score Gene Family Method Actions
AT2G14850 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g103257 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Aop_g06522 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Azfi_s0108.g045237 No alias component *(ADA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Ceric.24G023100.1 Ceric.24G023100 component *(ADA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Ceric.25G027300.1 Ceric.25G027300 component *(ADA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
GSVIVT01016065001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
GSVIVT01035521001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
GSVIVT01037861001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
LOC_Os12g39090.2 LOC_Os12g39090 component ADA1 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Lfl_g02173 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
MA_7243g0030 No alias component ADA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Mp5g08050.1 No alias component ADA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Pir_g19503 No alias component *(ADA1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Pir_g61284 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022496 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Sam_g10664 No alias component *(ADA1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Zm00001e003039_P001 Zm00001e003039 component ADA1 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Zm00001e005767_P001 Zm00001e005767 component ADA1 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Zm00001e041823_P001 Zm00001e041823 component ADA1 of SAGA transcription co-activator complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 5 335
No external refs found!