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  5. Solyc06g072130.4.1

Solyc06g072130.4.1 (BETA-TIP, Solyc06g072130)


Aliases : BETA-TIP, Solyc06g072130

Description : tonoplast intrinsic protein (TIP)


Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g072130.4.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT1G17810 BETA-TIP beta-tonoplast intrinsic protein 0.12 OrthoFinder output from all 47 species
AT1G73190 ALPHA-TIP, TIP3;1 Aquaporin-like superfamily protein 0.11 OrthoFinder output from all 47 species
GSVIVT01024235001 BETA-TIP Solute transport.channels.MIP family.tonoplast intrinsic... 0.13 OrthoFinder output from all 47 species
Gb_25884 GAMMA-TIP,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g44570.1 BETA-TIP, LOC_Os04g44570 tonoplast intrinsic protein (TIP) 0.07 OrthoFinder output from all 47 species
LOC_Os10g35050.1 BETA-TIP, LOC_Os10g35050 tonoplast intrinsic protein (TIP) 0.07 OrthoFinder output from all 47 species
MA_10426681g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
MA_10426909g0020 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
MA_10437001g0030 GAMMA-TIP,... Aquaporin TIP1-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g11780.1 ATTIP2;1,... tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species
Msp_g35021 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g08152 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Ore_g29134 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g42597 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g43901 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g05016 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15353 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g16840 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g54349 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Spa_g01521 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Tin_g24068 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e004496_P002 BETA-TIP, Zm00001e004496 tonoplast intrinsic protein (TIP) 0.05 OrthoFinder output from all 47 species
Zm00001e007523_P001 BETA-TIP, Zm00001e007523 tonoplast intrinsic protein (TIP) 0.04 OrthoFinder output from all 47 species
Zm00001e012616_P002 BETA-TIP, Zm00001e012616 tonoplast intrinsic protein (TIP) 0.08 OrthoFinder output from all 47 species
Zm00001e028253_P001 ATTIP1.3,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005811 lipid droplet IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 14 234
No external refs found!