1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g075220.1.1

Solyc06g075220.1.1 (ATFLA11, FLA11, Solyc06g075220)


Aliases : ATFLA11, FLA11, Solyc06g075220

Description : fasciclin-type arabinogalactan protein


Gene families : OG0000997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000997_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g075220.1.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00224100 FLA7,... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AMTR_s00007p00166710 ATFLA11, FLA11,... Cell wall.cell wall proteins.hydroxyproline-rich... 0.17 OrthoFinder output from all 47 species
AT1G03870 FLA9 FASCICLIN-like arabinoogalactan 9 0.04 OrthoFinder output from all 47 species
AT2G04780 FLA7 FASCICLIN-like arabinoogalactan 7 0.05 OrthoFinder output from all 47 species
AT2G20520 FLA6 FASCICLIN-like arabinogalactan 6 0.04 OrthoFinder output from all 47 species
AT5G03170 ATFLA11, FLA11 FASCICLIN-like arabinogalactan-protein 11 0.26 OrthoFinder output from all 47 species
AT5G44130 FLA13 FASCICLIN-like arabinogalactan protein 13 precursor 0.03 OrthoFinder output from all 47 species
AT5G60490 FLA12 FASCICLIN-like arabinogalactan-protein 12 0.22 OrthoFinder output from all 47 species
Adi_g081849 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g092723 SOS5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g094376 FLA9 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g104686 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g123114 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07898 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12078 ATFLA11, FLA11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12402 FLA7 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g19811 FLA7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05479 ATFLA11, FLA11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07784 FLA7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13025 SOS5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g49885 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52617 FLA12 Fasciclin-type arabinogalactan protein & original... 0.05 OrthoFinder output from all 47 species
Aob_g30185 SOS5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g01653 SOS5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05102 SOS5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20860 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g32906 FLA9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22350.t1 FLA7, Aspi01Gene22350 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56705.t1 FLA7, Aspi01Gene56705 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66179.t1 FLA12, Aspi01Gene66179 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
Cba_g01638 SOS5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03090 FLA12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11000 FLA7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G043100.1 SOS5, Ceric.07G043100 not classified & original description: pacid=50627558... 0.03 OrthoFinder output from all 47 species
Ceric.10G036000.1 Ceric.10G036000 not classified & original description: pacid=50611973... 0.04 OrthoFinder output from all 47 species
Ceric.12G007400.1 ATFLA11, FLA11,... not classified & original description: pacid=50600882... 0.06 OrthoFinder output from all 47 species
Ceric.12G007500.1 ATFLA11, FLA11,... not classified & original description: pacid=50602063... 0.02 OrthoFinder output from all 47 species
Ceric.19G073100.1 Ceric.19G073100 not classified & original description: pacid=50576358... 0.03 OrthoFinder output from all 47 species
Ceric.28G027100.1 ATFLA11, FLA11,... not classified & original description: pacid=50570256... 0.03 OrthoFinder output from all 47 species
Ceric.28G027400.1 FLA7, Ceric.28G027400 not classified & original description: pacid=50570668... 0.03 OrthoFinder output from all 47 species
Ceric.38G066200.1 SOS5, Ceric.38G066200 not classified & original description: pacid=50580301... 0.05 OrthoFinder output from all 47 species
Ceric.39G038300.1 ATFLA11, FLA11,... not classified & original description: pacid=50582633... 0.08 OrthoFinder output from all 47 species
Dac_g01372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07272 FLA7 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g09990 FLA7 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g10854 SOS5 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g16387 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17944 FLA13 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17954 FLA9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020616001 FLA9 Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01025167001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.26 OrthoFinder output from all 47 species
GSVIVT01025660001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.2 OrthoFinder output from all 47 species
GSVIVT01025662001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.17 OrthoFinder output from all 47 species
GSVIVT01025663001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01025665001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01025669001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01025671001 ATFLA11, FLA11 Cell wall.cell wall proteins.hydroxyproline-rich... 0.17 OrthoFinder output from all 47 species
Gb_01998 ATFLA11, FLA11 fasciclin-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
LOC_Os01g06580.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
LOC_Os01g47780.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os02g20540.1 FLA6, LOC_Os02g20540 fasciclin-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
LOC_Os02g20560.1 FLA9, LOC_Os02g20560 fasciclin-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
LOC_Os04g39600.1 FLA7, LOC_Os04g39600 fasciclin-type arabinogalactan protein 0.08 OrthoFinder output from all 47 species
LOC_Os05g07060.1 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
LOC_Os05g48890.1 FLA9, LOC_Os05g48890 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os05g48900.1 FLA13, LOC_Os05g48900 fasciclin-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
LOC_Os08g39270.1 FLA7, LOC_Os08g39270 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os09g30486.1 FLA7, LOC_Os09g30486 fasciclin-type arabinogalactan protein 0.1 OrthoFinder output from all 47 species
Len_g00384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g02171 ATFLA11, FLA11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13731 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17277 FLA7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21109 FLA7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g10583 FLA12 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_5195g0010 FLA12 Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_59950g0010 ATFLA11, FLA11 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g05705 FLA7 Fasciclin-type arabinogalactan protein & original... 0.07 OrthoFinder output from all 47 species
Msp_g09506 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g23143 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10980 FLA7 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g14860 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14877 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13961 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g31067 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20307 SOS5 regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.05 OrthoFinder output from all 47 species
Ppi_g10779 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24427 FLA7 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g26588 SOS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60593 SOS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011051 FLA10 not classified & original description: CDS=1-792 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020398 ATFLA11, FLA11 not classified & original description: CDS=1-771 0.02 OrthoFinder output from all 47 species
Solyc07g048090.2.1 FLA7, Solyc07g048090 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Solyc07g053540.1.1 FLA9, Solyc07g053540 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Spa_g07360 FLA7 not classified & original description: none 0.14 OrthoFinder output from all 47 species
Spa_g07630 FLA7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21452 SOS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24482 FLA7 not classified & original description: none 0.13 OrthoFinder output from all 47 species
Spa_g49660 SOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03821 FLA7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12335 SOS5 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g13713 FLA7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g32690 SOS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010053_P001 FLA7, Zm00001e010053 fasciclin-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Zm00001e016840_P001 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.17 OrthoFinder output from all 47 species
Zm00001e020209_P002 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Zm00001e024362_P001 FLA7, Zm00001e024362 fasciclin-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Zm00001e024743_P001 FLA6, Zm00001e024743 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Zm00001e026526_P001 FLA9, Zm00001e026526 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Zm00001e027481_P001 ATFLA11, FLA11,... fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e032425_P001 FLA6, Zm00001e032425 Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e041064_P001 FLA7, Zm00001e041064 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 48 182
No external refs found!