1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g076970.3.1

Solyc06g076970.3.1 (ROC7, Solyc06g076970)


Aliases : ROC7, Solyc06g076970

Description : protein folding catalyst


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g076970.3.1

Target Alias Description ECC score Gene Family Method Actions
AT4G34960 No alias Cyclophilin-like peptidyl-prolyl cis-trans isomerase... 0.03 OrthoFinder output from all 47 species
AT5G58710 ROC7 rotamase CYP 7 0.07 OrthoFinder output from all 47 species
Adi_g026560 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g089449 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23052 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05955 ROC1 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12365 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06151 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001096 No alias EC_5.2 cis-trans-isomerase & original description: CDS=103-960 0.03 OrthoFinder output from all 47 species
Cba_g29143 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G059600.1 ROC7, Ceric.10G059600 EC_5.2 cis-trans-isomerase & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.29 No alias Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001636.9 CYP5, ATCYP5, CYP19-4 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020904.49 ATCYP20-2, CYP20-2 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Cre06.g284900 CYP5, ATCYP5, CYP19-4 Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
Dac_g03046 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g30421 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09811 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31037 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024738001 ROC7 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Len_g08391 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00741 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c13_5300V3.1 ATCYP20-2,... cyclophilin 20-2 0.02 OrthoFinder output from all 47 species
Smo111263 ROC7 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Spa_g10915 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19009 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030204_P001 ROC7, Zm00001e030204 protein folding catalyst 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034998 oligosaccharyltransferase I complex IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 42 201
No external refs found!