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  5. Solyc06g084540.3.1

Solyc06g084540.3.1 (Solyc06g084540)


Aliases : Solyc06g084540

Description : no hits & (original description: none)


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g084540.3.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G58450 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G62550 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g054132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37521.t1 Aspi01Gene37521 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025221 No alias not classified & original description: CDS=693-1163 0.04 OrthoFinder output from all 47 species
Azfi_s0091.g042829 No alias not classified & original description: CDS=1-378 0.03 OrthoFinder output from all 47 species
Ceric.07G000800.1 Ceric.07G000800 not classified & original description: pacid=50627155... 0.01 OrthoFinder output from all 47 species
Ceric.1Z137200.1 Ceric.1Z137200 not classified & original description: pacid=50577014... 0.03 OrthoFinder output from all 47 species
Dac_g00478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20927 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000443001 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01011877001 No alias Universal stress protein A-like protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01024846001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_20331 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_24984 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g32780.1 LOC_Os01g32780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g57450.1 LOC_Os01g57450 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g63010.1 LOC_Os01g63010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g53900.1 LOC_Os03g53900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g19280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g00411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426703g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10437265g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_12540g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_228169g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_93977g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp5g17000.1 RD2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g28920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g54924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000709 No alias not classified & original description: CDS=1-528 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009108 RD2 not classified & original description: CDS=258-785 0.02 OrthoFinder output from all 47 species
Sam_g06182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo79236 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g21428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016001_P001 Zm00001e016001 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027691_P001 Zm00001e027691 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e040676_P001 Zm00001e040676 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004564 beta-fructofuranosidase activity IEP HCCA
MF GO:0004575 sucrose alpha-glucosidase activity IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0090599 alpha-glucosidase activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 7 151
No external refs found!