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  5. Solyc07g005530.4.1

Solyc07g005530.4.1 (UBP23, Solyc07g005530)


Aliases : UBP23, Solyc07g005530

Description : deubiquitinase (UBP23)


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g005530.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00205690 UBP23,... Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Adi_g023978 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114935 UBP23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14423 UBP19 regulatory deubiquitinase *(UBP15) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14073 UBP23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01298 UBP25 deubiquitinase *(UBP25) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G085100.1 UBP23, Ceric.03G085100 deubiquitinase *(UBP23) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.28G067600.1 UBP23, Ceric.28G067600 deubiquitinase *(UBP23) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g26398 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09709 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10823 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431488g0010 UBP23 deubiquitinase (UBP23) 0.02 OrthoFinder output from all 47 species
Mp1g03220.1 UBP25 Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g03824 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29641 UBP25 deubiquitinase *(UBP25) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01994 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05909 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24176 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26124 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 122 422
No external refs found!