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  5. Solyc07g006870.4.1

Solyc07g006870.4.1 (XTR3, XTH25, Solyc07g006870)


Aliases : XTR3, XTH25, Solyc07g006870

Description : Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana (sp|q38907|xth25_arath : 383.0) & Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 323.7)


Gene families : OG0000079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g006870.4.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT5G57550 XTR3, XTH25 xyloglucan endotransglucosylase/hydrolase 25 0.04 OrthoFinder output from all 47 species
Adi_g017857 XTH8 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019777 XTH16 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16091.t1 XTH6, Aspi01Gene16091 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48122 XTH9 xyloglucan/beta-glucan hydrolase *(EG16) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01012635001 XTH8 Probable xyloglucan endotransglucosylase/hydrolase... 0.05 OrthoFinder output from all 47 species
GSVIVT01029165001 XTR6, XTH23 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
GSVIVT01029170001 TCH4, XTH22 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
GSVIVT01029173001 XTR6, XTH23 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Gb_04597 XTH9 Xyloglucan endotransglucosylase/hydrolase protein 9... 0.04 OrthoFinder output from all 47 species
Gb_21649 XTH10 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Lfl_g06408 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434153g0020 XTH5, EXGT-A4 Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from all 47 species
MA_148g0010 XTH9 Xyloglucan endotransglucosylase/hydrolase protein 9... 0.06 OrthoFinder output from all 47 species
MA_476450g0010 XTH6 Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from all 47 species
MA_682426g0010 XTH5, EXGT-A4 Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from all 47 species
MA_7132g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_781557g0010 XTH5, EXGT-A4 Enzyme classification.EC_2 transferases.EC_2.4... 0.03 OrthoFinder output from all 47 species
Mp2g17780.1 XTH7 Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from all 47 species
Mp2g21490.1 XTH7 Enzyme classification.EC_2 transferases.EC_2.4... 0.04 OrthoFinder output from all 47 species
Mp4g10000.1 XTH5, EXGT-A4 Enzyme classification.EC_2 transferases.EC_2.4... 0.03 OrthoFinder output from all 47 species
Ore_g00992 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03078 XTH16 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29835 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01794 XTR7, XTH15 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18401 No alias EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19646 XTH8 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024202_P001 XTH5, EXGT-A4,... Probable xyloglucan endotransglucosylase/hydrolase... 0.04 OrthoFinder output from all 47 species
Zm00001e040081_P001 TCH4, XTH22,... Xyloglucan endotransglycosylase/hydrolase protein 8... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
CC GO:0005618 cell wall IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
BP GO:0006073 cellular glucan metabolic process IEA Interproscan
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA Interproscan
CC GO:0048046 apoplast IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR010713 XET_C 238 279
IPR000757 GH16 32 211
No external refs found!