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  5. Solyc07g042580.3.1

Solyc07g042580.3.1 (Solyc07g042580)


Aliases : Solyc07g042580

Description : TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana (sp|f4ik92|torl2_arath : 636.0)


Gene families : OG0000975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g042580.3.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00212090 evm_27.TU.AmTr_v1... TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00062p00101520 TOR1, CN, SPR2,... Cytoskeleton.microtubular network.microtubule... 0.02 OrthoFinder output from all 47 species
AT2G07170 No alias ARM repeat superfamily protein 0.11 OrthoFinder output from all 47 species
Aev_g17645 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Aev_g19315 TOR1, CN, SPR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22659 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Aop_g17812 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene42665.t1 TOR1, CN, SPR2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50709.t1 TOR1, CN, SPR2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17419 TOR1, CN, SPR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G021300.1 TOR1, CN, SPR2,... not classified & original description: pacid=50627279... 0.01 OrthoFinder output from all 47 species
Ceric.28G043900.1 TOR1, CN, SPR2,... not classified & original description: pacid=50569898... 0.03 OrthoFinder output from all 47 species
Dac_g11345 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ehy_g05063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07055 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
GSVIVT01007847001 No alias TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032268001 No alias TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
Gb_05823 No alias TORTIFOLIA1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g13600.1 LOC_Os06g13600 TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g33630.1 TOR1, CN, SPR2,... microtubule growth pause state regulator (SPR2) 0.02 OrthoFinder output from all 47 species
LOC_Os09g38710.2 LOC_Os09g38710 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g10402 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Len_g10741 TOR1, CN, SPR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_102352g0010 TOR1, CN, SPR2 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
MA_20584g0010 No alias TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Mp3g24000.1 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.03 OrthoFinder output from all 47 species
Msp_g14210 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ore_g30408 TOR1, CN, SPR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g47867 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.01 OrthoFinder output from all 47 species
Pnu_g25847 TOR1, CN, SPR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31226 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0177.g024637 TOR1, CN, SPR2 not classified & original description: CDS=1-4446 0.03 OrthoFinder output from all 47 species
Sam_g08317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26424 No alias regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Smo150575 TOR1, CN, SPR2 Cytoskeleton.microtubular network.microtubule... 0.03 OrthoFinder output from all 47 species
Zm00001e034876_P002 Zm00001e034876 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000357 HEAT 235 262
IPR026003 Cohesin_HEAT 104 128
No external refs found!