Aliases : Solyc07g044780
Description : RING-v-class E3 ligase
Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00253970 | evm_27.TU.AmTr_v1... | No description available | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00023p00139440 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00182780 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33633 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene09773.t1 | Aspi01Gene09773 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G009300.1 | Ceric.15G009300 | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14801 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g19756 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g10273 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g06920.2 | LOC_Os02g06920 | RING-v-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Len_g01693 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00704 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g03458 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g12012 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0028.g009961 | No alias | E3 ubiquitin ligase & original description: CDS=391-1818 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0092.g018968 | No alias | bHLH-type transcription factor & original description: CDS=1-675 | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02444 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | HCCA |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | HCCA |
| BP | GO:0016042 | lipid catabolic process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011016 | Znf_RING-CH | 243 | 290 |
| No external refs found! |
