Aliases : Solyc07g045510
Description : RNA editing factor (MEF7)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G09040 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G26782 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT3G49142 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G21300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G39530 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT5G08490 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g033179 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18446 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18511 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19051 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g24134 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g26584 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30540 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g31288 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33246 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g38981 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g02602 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08018 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13395 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g16183 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene26329.t1 | Aspi01Gene26329 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g011042 | No alias | not classified & original description: CDS=1-2970 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G014900.1 | Ceric.10G014900 | not classified & original description: pacid=50613343... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.13G069100.1 | CRR22, Ceric.13G069100 | not classified & original description: pacid=50635982... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g21976 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05756 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08293 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g08973 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g16964 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36949 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38580 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g43123 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g04444 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g12647 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g22814 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g31027 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g32620.1 | LOC_Os03g32620 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g38190.2 | LOC_Os05g38190 | Pentatricopeptide repeat-containing protein At2g27610... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os06g29800.1 | LOC_Os06g29800 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g28830.1 | LOC_Os08g28830 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g04367 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03801 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g03905 | REME1 | not classified & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Msp_g34481 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g36747 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g41336 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g46049 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g46094 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g04998 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g06673 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g06818 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g15298 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g15832 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g20342 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g28137 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g41062 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g42117 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g44738 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000052 | EMB2758 | not classified & original description: CDS=1-1683 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004530 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2559 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0015.g006421 | No alias | not classified & original description: CDS=1-675 | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0076.g017463 | No alias | not classified & original description: CDS=1-2316 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0148.g023237 | No alias | not classified & original description: CDS=1-2250 | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 698 | 745 |
| IPR002885 | Pentatricopeptide_repeat | 158 | 203 |
| IPR002885 | Pentatricopeptide_repeat | 596 | 644 |
| IPR002885 | Pentatricopeptide_repeat | 468 | 493 |
| IPR002885 | Pentatricopeptide_repeat | 262 | 285 |
| IPR002885 | Pentatricopeptide_repeat | 395 | 425 |
| IPR002885 | Pentatricopeptide_repeat | 570 | 595 |
| IPR002885 | Pentatricopeptide_repeat | 367 | 392 |
| IPR002885 | Pentatricopeptide_repeat | 290 | 316 |
| IPR032867 | DYW_dom | 874 | 995 |
| No external refs found! |
