1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g052780.3.1

Solyc07g052780.3.1 (Solyc07g052780)


Aliases : Solyc07g052780

Description : effector receptor (NLR)


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g052780.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00217790 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00126980 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G17610 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT1G17615 No alias Disease resistance protein (TIR-NBS class) 0.06 OrthoFinder output from all 47 species
AT1G56520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT1G56540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G63750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G63860 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT1G63880 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G72840 No alias Disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from all 47 species
AT1G72850 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT1G72940 No alias Toll-Interleukin-Resistance (TIR) domain-containing protein 0.05 OrthoFinder output from all 47 species
AT2G14080 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT3G04210 No alias Disease resistance protein (TIR-NBS class) 0.04 OrthoFinder output from all 47 species
AT3G04220 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT4G16890 SNC1, BAL disease resistance protein (TIR-NBS-LRR class), putative 0.05 OrthoFinder output from all 47 species
AT5G22690 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G41540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT5G46260 No alias disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.03 OrthoFinder output from all 47 species
AT5G49140 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT5G58120 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Aev_g14789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12103 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g27334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g61290 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene48806.t1 Aspi01Gene48806 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g40335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51801 LAZ5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g32328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012762001 No alias External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
GSVIVT01020980001 No alias External stimuli response.biotic stress.pathogen... 0.05 OrthoFinder output from all 47 species
GSVIVT01029009001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_03492 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_04246 No alias effector receptor (NLR) 0.08 OrthoFinder output from all 47 species
Gb_09783 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Gb_11356 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_12318 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_17905 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
Gb_18407 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_20302 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Gb_23544 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_25097 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
Gb_29200 MEKK4, ATWRKY19,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_36252 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_10097127g0010 No alias effector receptor (NLR) 0.08 OrthoFinder output from all 47 species
MA_10430440g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10431791g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10432427g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_10433003g0040 No alias effector receptor (NLR) 0.07 OrthoFinder output from all 47 species
MA_10434210g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10434300g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
MA_12346g0030 No alias effector receptor (NLR) 0.09 OrthoFinder output from all 47 species
MA_146875g0010 No alias effector receptor (NLR) 0.06 OrthoFinder output from all 47 species
MA_263716g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
MA_395749g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_410141g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_4576769g0010 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
MA_750097g0010 No alias effector receptor (NLR) 0.06 OrthoFinder output from all 47 species
MA_7692406g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_8963386g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Pir_g25030 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34544 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36302 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g37315 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37963 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g43673 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46217 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49159 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g52052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g032650.3.1 Solyc02g032650 effector receptor (NLR) 0.09 OrthoFinder output from all 47 species
Solyc04g007320.3.1 Solyc04g007320 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc07g052800.3.1 Solyc07g052800 TMV resistance protein N OS=Nicotiana glutinosa... 0.09 OrthoFinder output from all 47 species
Solyc12g097020.2.1 Solyc12g097020 effector receptor (NLR) 0.07 OrthoFinder output from all 47 species
Spa_g37169 LAZ5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54642 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 11 147
No external refs found!