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  5. Solyc07g053480.4.1

Solyc07g053480.4.1 (AtRABA1f, RABA1f,...)


Aliases : AtRABA1f, RABA1f, Solyc07g053480

Description : A-class RAB GTPase


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g053480.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00044920 ATHSGBP, RABA1d,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Aev_g18147 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06909 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06019 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59724.t1 RABA2b,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00782 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G069500.1 AtRABA1f,... A-class RAB GTPase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g19694 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08021 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g01480.1 ATRABA2A,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
MA_10430522g0010 ATRABA2A,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
MA_109703g0010 AtRABA1f, RABA1f A-class RAB GTPase 0.07 OrthoFinder output from all 47 species
Smo230012 AtRABA5d, RABA5d Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Spa_g48714 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 175
No external refs found!