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  5. Solyc07g055577.1.1

Solyc07g055577.1.1 (CRK8, Solyc07g055577)


Aliases : CRK8, Solyc07g055577

Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 199.0)


Gene families : OG0000741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000741_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g055577.1.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene23533.t1 CRK8, Aspi01Gene23533 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34322.t1 CRK8, Aspi01Gene34322 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62107.t1 CRK8, Aspi01Gene62107 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc04g050865.1.1 CRK8, Solyc04g050865 Retrovirus-related Pol polyprotein from transposon RE1... 0.05 OrthoFinder output from all 47 species
Solyc04g064805.1.1 CRK8, Solyc04g064805 Retrovirus-related Pol polyprotein from transposon RE1... 0.05 OrthoFinder output from all 47 species
Solyc05g011883.1.1 CRK8, Solyc05g011883 Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Solyc06g066853.1.1 CRK8, Solyc06g066853 Retrovirus-related Pol polyprotein from transposon RE1... 0.05 OrthoFinder output from all 47 species
Solyc07g018023.1.1 CRK8, Solyc07g018023 Uncharacterized mitochondrial protein AtMg00810... 0.04 OrthoFinder output from all 47 species
Solyc09g015065.1.1 CRK8, Solyc09g015065 Retrovirus-related Pol polyprotein from transposon RE1... 0.06 OrthoFinder output from all 47 species
Solyc11g012815.1.1 ORF240B, Solyc11g012815 Uncharacterized mitochondrial protein AtMg00810... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 3 82
No external refs found!