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  5. Solyc07g056570.1.1

Solyc07g056570.1.1 (NCED3, SIS7, STO1,...)


Aliases : NCED3, SIS7, STO1, ATNCED3, Solyc07g056570

Description : neoxanthin cleavage protein


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g056570.1.1

Target Alias Description ECC score Gene Family Method Actions
AT3G14440 NCED3, SIS7,... nine-cis-epoxycarotenoid dioxygenase 3 0.05 OrthoFinder output from all 47 species
AT4G18350 NCED2, ATNCED2 nine-cis-epoxycarotenoid dioxygenase 2 0.02 OrthoFinder output from all 47 species
Als_g23969 ATNCED5, NCED5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24904.t1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Cba_g02022 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Cba_g19295 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Dcu_g39142 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ehy_g26538 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
GSVIVT01038080001 NCED3, SIS7,... Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 OrthoFinder output from all 47 species
LOC_Os03g44380.1 NCED3, SIS7,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
LOC_Os07g05940.1 ATNCED9, NCED9,... neoxanthin cleavage protein 0.05 OrthoFinder output from all 47 species
Pnu_g13417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g40059 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Solyc08g016720.1.1 NCED3, SIS7,... neoxanthin cleavage protein 0.04 OrthoFinder output from all 47 species
Zm00001e017976_P001 NCED3, SIS7,... neoxanthin cleavage protein 0.04 OrthoFinder output from all 47 species
Zm00001e032833_P001 ATNCED9, NCED9,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 134 596
No external refs found!