Solyc07g062380.1.1 (Solyc07g062380)

Aliases : Solyc07g062380

Description : transcription factor (DOG)

Gene families : OG0001119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001119_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g062380.1.1
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
AT3G14880	No alias	BEST Arabidopsis thaliana protein match is:...	0.03	OrthoFinder output from all 47 species
AT4G18650	No alias	transcription factor-related	0.03	OrthoFinder output from all 47 species
AT4G18660	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.03	OrthoFinder output from all 47 species
AT4G18680	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.06	OrthoFinder output from all 47 species
Dcu_g02464	No alias	DOG-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01021229001	No alias	Protein DOG1-like 4 OS=Arabidopsis thaliana	0.1	OrthoFinder output from all 47 species
GSVIVT01022365001	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.05	OrthoFinder output from all 47 species
LOC_Os05g48650.1	LOC_Os05g48650	transcription factor (DOG)	0.03	OrthoFinder output from all 47 species
MA_278704g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Pnu_g22337	GSQ5, DOG1, ATDOG1	DOG-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Pnu_g27300	No alias	DOG-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005811	lipid droplet	IEP	HCCA
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025422	TGA_domain	20	96

External Links

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Solyc07g062380.1.1 (Solyc07g062380)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation