Solyc07g062630.1.1 (Solyc07g062630)

Aliases : Solyc07g062630

Description : subfamily ABCG transporter

Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g062630.1.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G53270	No alias	ABC-2 type transporter family protein	0.05	OrthoFinder output from all 47 species
AT2G37360	No alias	ABC-2 type transporter family protein	0.04	OrthoFinder output from all 47 species
AT5G19410	No alias	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
Dac_g23513	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g34793	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g38683	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g10068	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01014222001	No alias	ABC transporter G family member 10 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01025582001	No alias	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01037274001	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
LOC_Os03g17350.1	LOC_Os03g17350	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os05g02890.1	LOC_Os05g02890	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Len_g50392	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.02	OrthoFinder output from all 47 species
MA_529254g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_856g0010	No alias	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Mp2g07990.1	No alias	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Mp3g16700.1	No alias	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Mp5g04860.1	No alias	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Msp_g23417	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g37386	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g40770	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g26296	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g61308	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.07	OrthoFinder output from all 47 species
Smo134275	No alias	External stimuli response.biotic...	0.03	OrthoFinder output from all 47 species
Solyc09g005970.1.1	Solyc09g005970	subfamily ABCG transporter	0.07	OrthoFinder output from all 47 species
Spa_g41222	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e001269_P001	Zm00001e001269	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e019365_P001	Zm00001e019365	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e031556_P001	Zm00001e031556	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	55	204
IPR013525	ABC_2_trans	346	556

External Links

No external refs found!

Solyc07g062630.1.1 (Solyc07g062630)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation