1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g062970.3.1

Solyc07g062970.3.1 (Solyc07g062970)


Aliases : Solyc07g062970

Description : clade F phosphatase


Gene families : OG0000578 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000578_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g062970.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00183p00042550 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
AT2G34740 No alias Protein phosphatase 2C family protein 0.04 OrthoFinder output from all 47 species
AT4G28400 No alias Protein phosphatase 2C family protein 0.04 OrthoFinder output from all 47 species
Adi_g001927 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36138 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g40394 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11484 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70124 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06065.t1 Aspi01Gene06065 clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10471.t1 Aspi01Gene10471 clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030811 No alias clade F phosphatase & original description: CDS=230-1078 0.03 OrthoFinder output from all 47 species
Dcu_g22132 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004849001 No alias Protein modification.dephosphorylation.serine/threonine... 0.04 OrthoFinder output from all 47 species
GSVIVT01009035001 PAPP2C Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
MA_8985873g0010 PIA1 Probable protein phosphatase 2C 20 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp5g14150.1 No alias clade F phosphatase 0.03 OrthoFinder output from all 47 species
Msp_g24935 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01803 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19301 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19235 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010471_P001 Zm00001e010471 clade F phosphatase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 44 274
No external refs found!