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  5. Solyc07g065030.3.1

Solyc07g065030.3.1 (ATSYP51, SYP51, Solyc07g065030)


Aliases : ATSYP51, SYP51, Solyc07g065030

Description : SYP5 group Qc-type SNARE protein


Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g065030.3.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT1G16240 ATSYP51, SYP51 syntaxin of plants 51 0.03 OrthoFinder output from all 47 species
AT1G79590 ATSYP52, SYP52 syntaxin of plants 52 0.06 OrthoFinder output from all 47 species
Ala_g13757 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Als_g05382 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ceric.14G030000.1 ATSYP52, SYP52,... Qc-type SYP5-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Dac_g01337 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.06 OrthoFinder output from all 47 species
Dcu_g13902 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ore_g30768 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pnu_g00477 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Zm00001e006817_P002 ATSYP52, SYP52,... SYP5 group Qc-type SNARE protein 0.03 OrthoFinder output from all 47 species
Zm00001e022242_P001 ATSYP52, SYP52,... SYP5 group Qc-type SNARE protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 174 224
No external refs found!