Solyc07g065430.2.1 (ATSPO11-1, Solyc07g065430)

Aliases : ATSPO11-1, Solyc07g065430

Description : Meiotic recombination protein SPO11-1 OS=Arabidopsis thaliana (sp|q9m4a2|spo11_arath : 304.0)

Gene families : OG0001338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001338_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g065430.2.1
Cluster	HCCA: Cluster_472

Target	Alias	Description	ECC score	Gene Family Method
Aev_g20443	SPO11-2	component a *(SPO11) of meiotic topoisomerase-VI complex...	0.03	OrthoFinder output from all 47 species
Cba_g13584	SPO11-2	component a *(SPO11) of meiotic topoisomerase-VI complex...	0.02	OrthoFinder output from all 47 species
Cba_g74006	SPO11-2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os08g06050.1	SPO11-2, LOC_Os08g06050	component a (SPO11) of meiotic topoisomerase-VI complex	0.04	OrthoFinder output from all 47 species
Pnu_g30993	SPO11-2	component a *(SPO11) of meiotic topoisomerase-VI complex...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0030001	metal ion transport	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006121	HMA_dom	203	252

External Links

No external refs found!