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  5. Solyc08g005270.3.1

Solyc08g005270.3.1 (AtRCD1, RCD1, ATP8,...)


Aliases : AtRCD1, RCD1, ATP8, CEO1, CEO, Solyc08g005270

Description : Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana (sp|q8ry59|rcd1_arath : 424.0)


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005270.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00122750 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.04 OrthoFinder output from all 47 species
AT1G32230 AtRCD1, RCD1,... WWE protein-protein interaction domain protein family 0.04 OrthoFinder output from all 47 species
Adi_g056817 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Aop_g11358 AtRCD1, RCD1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08763 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g63770.4 SRO1, LOC_Os03g63770 Inactive poly [ADP-ribose] polymerase RCD1... 0.04 OrthoFinder output from all 47 species
Ore_g29275 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.04 OrthoFinder output from all 47 species
Sam_g29371 No alias organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g07052 AtRCD1, RCD1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023927_P003 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR022003 RST 513 577
No external refs found!