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  5. Solyc08g005500.4.1

Solyc08g005500.4.1 (Solyc08g005500)


Aliases : Solyc08g005500

Description : Putative late blight resistance protein homolog R1A-6 OS=Solanum demissum (sp|q6l438|r1a6_solde : 260.0)


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005500.4.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00252340 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00088510 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00050p00210650 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g63350... 0.04 OrthoFinder output from all 47 species
AMTR_s00071p00163290 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00163330 evm_27.TU.AmTr_v1... Probable disease resistance protein At5g63020... 0.04 OrthoFinder output from all 47 species
AMTR_s00078p00177570 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aspi01Gene56659.t1 Aspi01Gene56659 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014595001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_12859 No alias Probable disease resistance protein At4g27220... 0.05 OrthoFinder output from all 47 species
LOC_Os01g57870.1 RPS2, LOC_Os01g57870 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os04g39460.1 RPS2, LOC_Os04g39460 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g36410.1 RPS5, LOC_Os11g36410 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g23441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426937g0010 No alias Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
MA_10428221g0010 RPS5 Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
MA_128726g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g09190.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g09210.1 No alias Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
Smo111732 No alias Putative disease resistance protein At1g50180... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 158 396
No external refs found!