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  5. Solyc08g005540.2.1

Solyc08g005540.2.1 (Solyc08g005540)


Aliases : Solyc08g005540

Description : amino acid transporter (LAT)


Gene families : OG0000891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000891_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc08g005540.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00198660 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00199050 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
AMTR_s00217p00018260 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Aob_g08979 No alias amino acid transporter *(LAT) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene55600.t1 Aspi01Gene55600 amino acid transporter *(LAT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55601.t1 Aspi01Gene55601 amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01181 No alias amino acid transporter *(LAT) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G102300.1 Ceric.02G102300 amino acid transporter *(LAT) & original description:... 0.02 OrthoFinder output from all 47 species
Cre06.g292350 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Dac_g19844 No alias amino acid transporter *(LAT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025423001 No alias Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
LOC_Os03g25920.1 LOC_Os03g25920 amino acid transporter (LAT) 0.04 OrthoFinder output from all 47 species
Lfl_g05487 No alias amino acid transporter *(LAT) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g005900.2.1 Solyc01g005900 amino acid transporter (LAT) 0.07 OrthoFinder output from all 47 species
Solyc01g111800.4.1 Solyc01g111800 amino acid transporter (LAT) 0.04 OrthoFinder output from all 47 species
Tin_g03954 No alias amino acid transporter *(LAT) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001820_P001 Zm00001e001820 amino acid transporter (LAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 88 470
No external refs found!