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  5. Solyc08g007640.1.1

Solyc08g007640.1.1 (Solyc08g007640)


Aliases : Solyc08g007640

Description : no hits & (original description: none)


Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g007640.1.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01001450001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01022856001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01032204001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.03 OrthoFinder output from all 47 species
LOC_Os03g37720.1 LOC_Os03g37720 Disease resistance protein RGA2 OS=Solanum bulbocastanum... 0.03 OrthoFinder output from all 47 species
LOC_Os08g43000.1 LOC_Os08g43000 Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Solyc11g071420.3.1 Solyc11g071420 Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 182 200
IPR001611 Leu-rich_rpt 205 223
IPR001611 Leu-rich_rpt 228 246
No external refs found!