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  5. Solyc08g008220.3.1

Solyc08g008220.3.1 (UBC10, Solyc08g008220)


Aliases : UBC10, Solyc08g008220

Description : conjugation E2 protein


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g008220.3.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00142370 UBC10,... Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
AT5G41700 ATUBC8, UBC8 ubiquitin conjugating enzyme 8 0.03 OrthoFinder output from all 47 species
AT5G53300 UBC10 ubiquitin-conjugating enzyme 10 0.07 OrthoFinder output from all 47 species
AT5G56150 UBC30 ubiquitin-conjugating enzyme 30 0.03 OrthoFinder output from all 47 species
Aev_g46322 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30294 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32602 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10989 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18694 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39862 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19405 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g292800 UBC30 Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
Dac_g04910 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48511 EMB144, CIN4, COP10, FUS9 component *(COP10) of CDDD substrate adaptor module of... 0.02 OrthoFinder output from all 47 species
Ehy_g04269 ATUBC8, UBC8 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019484001 UBC10 Protein degradation.peptide... 0.07 OrthoFinder output from all 47 species
GSVIVT01025872001 UBC10 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
Gb_10818 UBC10 conjugation E2 protein 0.04 OrthoFinder output from all 47 species
Len_g18731 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23404 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31742 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20305 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05509 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48365 No alias E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g35317 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g36347 UBC3 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!